PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT07032
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 349aa    MW: 39048.9 Da    PI: 8.0523
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT07032genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM87.23.1e-271095184
       NAM  1 lppGfrFhPtdeelvveyLkkkvegkklel..eevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk 84
              lppGfrF P+deelv++yL+ kv++++l+   + ++ evd++ +ePw+Lp  +k +++ewyfFs rd+kyatg r+nrat+sgy k
  EMT07032 10 LPPGFRFYPSDEELVCHYLHGKVANQRLSGgaAGAMVEVDLHVHEPWELPDVAKLSTNEWYFFSFRDRKYATGLRTNRATRSGYSK 95
              79*************************66511346***************87788999*************************966 PP

2NAM97.91.5e-3011019551128
       NAM  51 vkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk........kgelvglkktLvfykgrapkgektdWvmheyrl 128
               +k +++ewyfFs rd+kyatg r++rat+sgyWkatgkd+ + s         + + vg++ktLvfy+grapkg+kt Wvmhe+r+
  EMT07032 110 AKLSTNEWYFFSFRDRKYATGLRTTRATRSGYWKATGKDRVIRSPrsssslsgRAAIVGMRKTLVFYRGRAPKGTKTCWVMHEFRI 195
               344678*************************************99655555444444***************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.92E-29793IPR003441NAC domain
PROSITE profilePS5100550.36610214IPR003441NAC domain
PfamPF023654.8E-131195IPR003441NAC domain
PfamPF023656.1E-15105195IPR003441NAC domain
SuperFamilySSF1019416.54E-37108214IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MGLRDIEMTL PPGFRFYPSD EELVCHYLHG KVANQRLSGG AAGAMVEVDL HVHEPWELPD  60
VAKLSTNEWY FFSFRDRKYA TGLRTNRATR SGYSKAPLRI RLGDPNQHVA KLSTNEWYFF  120
SFRDRKYATG LRTTRATRSG YWKATGKDRV IRSPRSSSSL SGRAAIVGMR KTLVFYRGRA  180
PKGTKTCWVM HEFRIENPHS PPKEDWVLCR VFHKKKADTD YAMDGEPELG GGAVCGSNYL  240
SSSSCHDPEQ YHHSPMASFP SIGAGGDHYQ LLPCDHHHPH GAAGVSLNDV HPFDGMPQLL  300
SYDSILDFSQ QVQGGRSAAA CLRAGADDQC DGALMDLGLE EHYNYNSLM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4dul_B2e-3812174168NAC domain-containing protein 19
4dul_A2e-3812174168NAC domain-containing protein 19
1ut7_B2e-3812174168NO APICAL MERISTEM PROTEIN
1ut7_A2e-3812174168NO APICAL MERISTEM PROTEIN
1ut4_B2e-3812174168NO APICAL MERISTEM PROTEIN
1ut4_A2e-3812174168NO APICAL MERISTEM PROTEIN
3swp_D2e-3812177171NAC domain-containing protein 19
3swp_C2e-3812177171NAC domain-containing protein 19
3swp_B2e-3812177171NAC domain-containing protein 19
3swp_A2e-3812177171NAC domain-containing protein 19
3swm_D2e-3812177171NAC domain-containing protein 19
3swm_C2e-3812177171NAC domain-containing protein 19
3swm_B2e-3812177171NAC domain-containing protein 19
3swm_A2e-3812177171NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3640020.0AK364002.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2020L05.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003572924.11e-140PREDICTED: NAC domain-containing protein 92
TrEMBLM8BVS20.0M8BVS2_AEGTA; Protein CUP-SHAPED COTYLEDON 3
STRINGMLOC_5165.11e-165(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69738166
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.12e-62NAC domain containing protein 74